PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

LPERR02G05500.1

Organism

Leersia perrieri

Taxonomic ID

77586

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia

Family

bZIP

Protein Properties

Length: 239aa MW: 25098.2 Da PI: 9.3938

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
LPERR02G05500.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.7	9.2e-07	140	182	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L eN++L++e+ l+ + +l +e+ LPERR02G05500.1 140 RSRKKMRLPEVQQLVRSLAVENESLREEMRALQRACTALSKEN 182 99*************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence Send to blast
MMAACAGEGD DEVAAGIICS LRGADLAGWT PPWWCGKQQV EEELIWPAVK RGKRSRRGSP 60 AVAGKGRWGR GSPASPLDYS GGSRSGSGSA SASTSGGEDG GAFCSPAATA TTTMPKVGGM 120 GRQHMTFPAA PSPLRPAGQR SRKKMRLPEV QQLVRSLAVE NESLREEMRA LQRACTALSK 180 ENDKLEIRFE ISSSKNNASA KDLKGKQLDQ QSDMQSAGGG FALPDLNLPV KDGADGSVH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	145	RSRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015626239.1	9e-98	PREDICTED: uncharacterized protein LOC4328519 isoform X1
TrEMBL	A0A0D9VD10	1e-174	A0A0D9VD10_9ORYZ; Uncharacterized protein
STRING	ORGLA02G0057900.1	1e-98	(Oryza glaberrima)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51